CDS

Accession Number TCMCG007C47846
gbkey CDS
Protein Id XP_033132958.1
Location complement(join(9926714..9926733,9927070..9927172,9927298..9927427,9928978..9929084,9929170..9929263,9929359..9929555,9929790..9929861,9929962..9930076,9930354..9930470,9930561..9930652,9930740..9930916,9931019..9931093,9931240..9931380,9931677..9931865,9932114..9932179,9932283..9932433,9932665..9932733,9932874..9933022,9933105..9933236,9933339..9933664,9933754..9933790,9933928..9933982,9934082..9934143,9934257..9934277,9934563..9934565))
Gene LOC103833520
GeneID 103833520
Organism Brassica rapa

Protein

Length 899aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033277067.1
Definition coatomer subunit beta'-3 isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGCTCAGACTCGATATCAAGAAAAAATTTGCTCAACGATCAGAGCGAGTGAAATCTGTGGATCTGCATCCTACAGAGCCATGGATTCTAGCAAGTTTGTATTCTGGAACCGTGTGTATCTGGAACTACCAGACTCAGACGATAACAAAATCTTTCGAGGTCACCGAATTGCCAGTTAGGTCGGCCAAGTTTATCCCACGAAAGCAATGGGTTGTGGCAGCAGCGGATGATATGTACATCCGTGTATACAACTACAACACAATGGACAAGGTTAAAGTGTTTGAGGCTCATTCCGATTACATTAGGTGTGTAGCTGTCCATCCAACCCTCCCATATGTGCTGTCATCTTCTGATGATATGCTCATAAAGCTCTGGGACTGGGAAAATGGTTGGGCCTGTACTCAGATCTTTGAGGGACATTCGCACTATGTGATGCAAGTGGTATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCATCACTTGACCGTTCCATAAAGATATGGAATCTTGGCTCCCCTGACCCAAATTTTACACTGGATGCTCATCAGAAAGGAGTCAACTGCGTAGATTATTTCACAGGGGGTGATAAGCCCTATTTAATTACTGGCTCTGATGATCAAACTGCTAAGGTATGGGACTATCAAACTAAAAGCTGTGTCCAGACGCTAGAAGGGCACACCCACAATGTATCTGCAGTATGTTTCCATCCGGAGCTTCCAATAATACTCACAGGCTCTGAGGATGGCACTGTTCGCATTTGGCACGCCACGACTTACAGGCTAGAGAACACATTGAATTATGCTCTCGAGAGAGTCTGGGCCATTGGTTACATAAAAAGTTCGCGCAGGGTTGTAATTGGATACGATGAAGGAACCATCATGGTCAAACTTGGACGAGAAATTCCTGTGGCTAGCATGGACAGTAGCGGAAAAATTATATGGGCTAAGCATAATGAAATCCAAACTGCAAACATCAAAAGTATTGGTGCCAGTTTCGAGGTTACTGATGGAGAAAGACTTCCCTTGGCTGTTAAAGATCTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCATAACCCAAACGGGAGGTTTGTCGTAGTCTGTGGGGATGGAGAGTACATAATCTACACAGCTTTGGCTTGGAGAAATAGGTCTTTCGGTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGGGAATGTGCAGTTCGAGAGAGCTCGTCAAAGATAAAGATATTCAATAAAAATTTCCAGGAAAGGAAGAGTATTCGGCCTACTTTCTCAGCTGAGAAGATTTTTGGAGGATCCTTGTTAGCAATGTGTTCAAATGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTGATTCAGCGAATTGATGTCACAGTAAAGAATCTTTATTGGGCAGAAAGTGGTGATTTAGTTGCCATTGCTAGTGATACGTCATTCTACATCCTGAAGTTCAATCGTGACTTGGTTTCCTCCCATTTTGCTAGTGGAAGACAAACTGATGAAGAAGGTGTTGAGGAGGCTTTTGAGGTTCTCCATGAGAATGATGAACGTGTTAGGACAGGTATATGGGTCGGGGACTGCTTCATTTACAACAACTCTTCTTCGAAGCTTAACTATTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGTCCAATGTATTTGCTAGGCTATATTGCCAACCAAAGTCGGGTCTACTTGGTAGACAAAGAATTCAATGTCATAGGATATACCCTGCTGCTTAGCCTGATTGAATACAAGACTCTTGTGATGCGGGGTGATTTGGACAAAGCCAATGAAATTTTACCTACAATTCCTAAAGAGCAGCATAACAATGTTGCTCATTTCTTGGAGTCTCGGGGAATGATTGAAGATGCTTTAGAAATTGCGACAGATCCTGACTACAGATTTGAGCTGGCCATACAATTGGGTAGACTTGAAATTGCCAAGGAAATCGCTGAAGAAGTGCAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAGTTAGCCATGTCTTCTGGCAAGCTCCAACTGGCCGAGGATTGCATGAAGTACGCTACGGATTTGAGTGGTTTGCTACTACTATATTCTTCTTTGGGAGATGCTGAAGGGATGTCAAAGCTTGCATCCCTTGCTAAGGAGCAGGGAAAGAACAATGTCGCCTTTCTTTGCTTATTCATGCTGGGTAGATTGGAAGATTGTCTGCAGTTATTGGTGGAGAGCAACCGGATACCAGAAGCTGCTCTGATGGCACGTTCTTATCTTCCAAGCAAAGTTTCAGAGATAGTAGCCCTCTGGAGAAAAGATCTAAGCAAGGTTAATTCGAAAGCAGCAGAATCTTTGGCTGATCCTGAAGAGTACCCAAATCTTTTTGAGGATTGGCAAGTTGCTCGTTCTGTTGAAGCTAATGCTGTAGAGGCGAGGGGAGTTTATGCTGCTGCAGAAAATTATGCAACCCAGGCCGATCAACCTTTCATTACCCTCGTGGAAGCCTTCAGAAACCTGCAAGTTGAAGCAGAAGAACCACTTGAAAATGGAGACAGAGATGACGAGGTAGCAGAAGAAAATGGTGAGGAAGAGAATGAAGGAGGTGAAGAAGAAGTGAATCAAGAAGAGGGAGTTGTTGATGAAGATTCTACAGATGGTAGTGCTGAGGTGCTTACGCCACATCAGTAG
Protein:  
MPLRLDIKKKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAAADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIILTGSEDGTVRIWHATTYRLENTLNYALERVWAIGYIKSSRRVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGASFEVTDGERLPLAVKDLGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFNKNFQERKSIRPTFSAEKIFGGSLLAMCSNDFICFYDWAECRLIQRIDVTVKNLYWAESGDLVAIASDTSFYILKFNRDLVSSHFASGRQTDEEGVEEAFEVLHENDERVRTGIWVGDCFIYNNSSSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKANEILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYATDLSGLLLLYSSLGDAEGMSKLASLAKEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYPNLFEDWQVARSVEANAVEARGVYAAAENYATQADQPFITLVEAFRNLQVEAEEPLENGDRDDEVAEENGEEENEGGEEEVNQEEGVVDEDSTDGSAEVLTPHQ